How to Flavor Kombucha: The Complete Second Fermentation Guide

How to create delicious, fizzy, personalized Kombucha with fruits, herbs, spices, and juices.

Learning how to flavor Kombucha is one of the most exciting parts of homebrewing. It’s where creativity meets fermentation magic.

 

In this guide, you’ll learn exactly when to add flavors, how much to use, and how to create consistent carbonation every time. Plus, we’ll share a few of our favorite recipes to get you started!

 

Whether you love fruity, floral, spicy, or herbal booch, this page gives you everything you need to become a Kombucha flavoring expert.

 

(Click here for our Complete How to Brew Kombucha Guide)

Quick Summary

  • Flavoring happens during Second Fermentation (F2) — after the SCOBY is removed.
  • Use fruit, juices, herbs, spices, or extracts for amazing flavor and carbonation.
  • Fill bottles to the neck, leave ½–1 inch of headspace, then store warm 1–5 days.
  • Always burp bottles daily to avoid over-carbonation.
  • Refrigerate when desired flavor and fizz peak.
  • Keep experimenting — flavor combinations are endless and incredibly fun.

What Is Second Fermentation (F2)?

Second Fermentation is the step where your finished First Fermentation (F1) Kombucha becomes sparkling, flavorful, and effervescent.

 

  • F1 makes plain, tart Kombucha
  • F2 adds flavor + creates carbonation

Think of F1 as making a base tea, and F2 as turning it into your signature beverage. (Later in this article, we’ll also explore Third Fermentation (F3) and discuss when it might be appropriate to add this extra step.)

When to Add Flavors

You should always add flavors after removing the SCOBY and starter liquid. These should be kept only in liquids containing tea and purified water. This protects the culture and keeps your SCOBY Hotel clean.

Perfect F2 Steps:

  1. Brew F1 → Test/taste → Remove SCOBY & starter tea
  2. Transfer Kombucha into bottles
  3. Add your flavorings
  4. Seal bottles tightly
  5. Store at warm room temperature 1–5 days
  6. Refrigerate to slow fermentation

What You Can Flavor Kombucha With

You can flavor Kombucha using virtually anything aromatic or edible. Keep in mind that the higher the sugar content of your flavoring medium, the more effervescence will develop. This means you will need to take extra care to burp your bottles daily to avoid explosions or geysers (Click here to check out our guide on “Bottle Bombs”). 

These are the most popular categories:

1. Fresh Fruit (most common & beginner-friendly)

Fruits add sugar, sugar fuels fizz, fizz makes happy brewers.

 

Examples:

 

  • Strawberries
  • Mango
  • Raspberries
  • Blueberries
  • Pineapple
  • Peaches
  • Apples
  • Watermelon

Use fresh, frozen, or dried fruit. Frozen fruit releases flavor fast.

 

Pro Tip: The smaller the pieces of fruit you use, the more flavor will get into your Kombucha. If you prefer more lightly flavored sips, be sure to use bigger pieces of fruit. If you LOVE intense flavor, you’ll want to possibly even muddle your fruit before adding it to the bottles.

2. Juices & Purees

One of the easiest ways to flavor Kombucha due to quick accessibility and consistent quality of the flavoring medium. This is a great way for beginners to get started in lieu of purchasing fresh fruits! Look for 100% fruit juice without preservatives.

 

Try:

 

  • Pomegranate juice
  • Passionfruit puree
  • Tart cherry
  • Pineapple juice
  • Orange or mandarin juice

Use 1–2 oz per 16 oz bottle. More sugar = more effervescence so tend to your bottles carefully as they ferment to avoid geysers and big messes!

3. Herbs & Botanical Add-Ins

Herbs help balance sweetness and add complexity. They can also be added to boost certain health benefits… studies show that the fermentation process can even enhance the efficacy of some plant compounds! (Ref: https://pmc.ncbi.nlm.nih.gov/articles/PMC11381286/)

 

Favorites include:

 

Fresh ginger is a natural carbonation booster. You can even use a combination of candied, dried, and fresh ginger to create an intensely gingery, stomach-friendly, gut-friendly functional beverage! (An absolute favorite!)

4. Spices & Warm Aromatics

Perfect for fall or cozy blends, these polyphenol-rich powerhouses will quickly overpower the flavor of your brew so be sure to start with small amounts for best results!

 

Some Favorites:

 

5. Extracts & Infusions

Use only alcohol-based extracts for safety. With these, a little goes a LONG way, so start conservatively and increase as desired.

 

Try:

 

How Much Flavoring to Add

Here’s a reliable rule of thumb for a 16 oz bottle:

  • Fruit pieces: 1–3 tbsp
  • Fruit puree: 1–2 tbsp
  • Juice: 1–2 oz
  • Fresh herbs: 2–4 sprigs
  • Spices: 1 small piece or pinch
  • Extracts: 3–10 drops

Always leave ½–1 inch of headspace.

How to Get the Best Carbonation

Flavoring = extra sugar. Extra sugar = more fizz. To guarantee great carbonation:

 

  • Store bottles warm (75–85°F / 24–29°C)
  • Use swing-top bottles or other airtight containers
  • Burp daily if using fruit
  • Add a small piece of ginger for extra bubbles
  • Don’t cold-store until carbonation peaks

Step-by-Step: How to Flavor Kombucha (Second Fermentation)

Step 1 — Brew Your First Ferment (F1)

Follow our recipe here: How to Make Kombucha

Step 2 — Remove SCOBY & Starter Tea

Place into a bowl or your SCOBY Hotel.

Step 3 — Add Flavorings to Bottles

Add fruit, juice, herbs, spices, or extracts directly to clean bottles.

Step 4 — Fill Bottles with Kombucha

Leave ½–1 inch of headspace.

Step 5 — Seal and Store Warm

Let bottles ferment 1–5 days. Taste daily.

Step 6 — Chill & Enjoy

Once flavored and fizzy: refrigerate.

50+ Kombucha Flavor Ideas (Tried And True!)

Fruit-Forward Favorites

Fresh Herbal Blends

  • Lemon Balm + Mint
  • Rosemary Citrus
  • Basil Blackberry
  • Lavender Peach
  • Ginger Lemongrass
herbal kombucha

Warm & Cozy Comforts

Floral & Botanical

floral kombucha

Exotic & Tropical

  • Passionfruit Mango
  • Guava Lime
  • Tamarind Ginger
  • Coconut Pineapple (with extract!)
tropical kombucha

Unique & Unexpected

coffee kombucha

⚠️ Common Flavoring Mistakes (and How to Avoid Them)

  • Using too much fruit: leads to bottle overflow
  • Underfilling bottles: reduces carbonation
  • Cold-fermenting: slows flavor development
  • Adding flavors during F1: harms SCOBY
  • Using plastic bottles: poor carbonation
  • Forgetting to burp bottles: risky pressure buildup

Keep flavoring in F2 only, and always watch your bottles. Geysers may look like fun on social media, but they’re not fun when you’re cleaning bits of fruit and a whole lotta Kombucha of your ceiling and out of your carpets, drapes, and pets!)

Kombucha Flavoring FAQ

1. Can I flavor Kombucha during first fermentation?

No — the SCOBY prefers plain tea. Flavor only during F2.

2. How long does flavored Kombucha last?

Kombucha never “spoils” but it may get too sour to enjoy. Also flavorings left in the bottle for a long time can negatively influence the flavor. But as long as you enjoy the taste and no mold appears, Kombucha can be stored at room temperature indefinitely.

3. Does fruit make Kombucha explode?

Fruit accelerates carbonation — always burp bottles daily to release pressure.

4. Can I flavor Kombucha without sugar?

Yes — use herbs, spices, or extracts. Fizz will be milder.

5. What bottles work best?

Swing-tops create the strongest carbonation and best flavor.

6. Can I flavor the second ferment with tisanes or fruity teas?

Yes you can flavor with literally anything that creates a beverage you enjoy. If you like it, try it!

7. Can I eat the flavorings after they have been in the Kombucha?

Yes! They may or may not taste good, the Kombucha takes a lot of the nutrients out, but give them a try!

8. How much flavoring should I add to Kombucha?

A little goes a long way. Start with a teaspoon or so per 16oz bottle and see if more or less creates the best flavor for you.

9. How long should I second ferment the Kombucha?

1-3 days is the average but you might let it go longer depending on carbonation and flavor.

Kombucha Flavoring & Bottling Safety

If not paying attention, small explosions can occur with the bottles. This is more likely if there is too much flavoring used or it is very hot, such as in Summer. To prevent explosions, burp the bottles by opening the caps slightly during the flavoring process (aka “second fermentation”) and allowing carbonation to escape. For more tips, visit this post: Bottling Kombucha Tea, Jun, Water Kefir and Milk Kefir Safely

How to Make Your Own Kombucha Flavor Recipe

Perhaps my favorite Kombucha flavorings recipe was inspired by ginger ale: a little bit of dried ginger can be added to the Kombucha for an extra kick. Ginger also increases carbonation in the Kombucha. Lemons and berries are also great additions to Kombucha. Elderberries and Goji berries are two of my favorite berry flavorings for Kombucha. Add frozen berries during cooler months. Some other seasonal Kombucha flavorings you should consider trying are:

 

One of the most delicious ways I’ve discovered to flavor Kombucha is with champagne or wine for a fun spritzer during hot summer months.

 

Check out this post for even MORE Kombucha flavoring ideas!

How to Flavor Kombucha in Batches

Large Vessel Second Fermentation (& then Third Fermentation in the Bottle)

For most people, the convenient way to flavor Kombucha is in the bottle. This is because you may only have a few bottles to flavor at a time. Also flavoring in each bottle allows you to create more variety, which many home brewers prefer. But there is another way to flavor Kombucha that might be the right fit for some people, and that’s flavoring in the brewing vessel or another vessel such as a gallon jar.

 

True Confession: This is our preferred way to flavor and bottle. We like flavor a large vessel, then strain the flavorings and then leave the brew in the bottle for 1-2 weeks until the carbonation has built up and the flavor is dry. So delicious!

Flavor Kombucha Tea in Large Batches

However, we NEVER recommend adding flavorings to the brew with the SCOBY. That is not how to flavor Kombucha successfully! Instead, this process is done AFTER the SCOBY and starter liquid have been removed for the next batch. By taking out the SCOBYs and placing them in a Hotel or other vessel, and then taking starter liquid from the top of the brew, we have protected the ingredients for the next batch. Then you can then add whatever you want to the remaining Kombucha in the vessel.

 

Then either cover with the cloth again or use a hard lid if you have one. Give the brew another 1-3 days in the vessel to extract the flavor and then bottle. After bottling, the brewing vessel will need a cleaning with soap and water to remove any flavoring residue. Rinse very clean!

 

Note: If you are doing Kombucha Continuous Brew (vs Batch Brew), simply use the spigot to fill up a gallon jar or other vessel. Add the flavors and strain after 1-3 days.

Third Fermentation – Straining Kombucha Flavorings to Extend Shelf Life

Another advantage of this method is that you can strain the flavors from the Kombucha as you bottle. This is not a requirement because the low pH of the Kombucha will not allow any mold or other contamination to occur with the fruit/flower pieces. That said, removing the flavorings will maintain the flavor of the Kombucha in the bottle longer than leaving them in as eventually they will degrade and mix into the bottle, potentially causing off flavors. Normally we strain ours out to extend the life but it is more work.

Then the process of building that carbonation in the bottle, usually for about 1-3 days without flavors, we call Third Fermentation.

Kombucha is fun to brew, fun to drink and fun to flavor. Get creative!

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